...
cd ; pwd
git clone http://github.com/PapenfussLab/gridss/
cd gridss/
git submodule init
git submodule update
cd src/main/c/gridsstools/htslib/
autoheader
autoconf
./configure && make
cd ..
autoheader
autoconf
./configure && make all
cd ; pwd
ls -la $PWD/miniconda3/pkgs/gridss-2.12.2-h270b39a_0/share/gridss-2.12.2-0/
ml purge
ml intel SAMtools/1.10-GCC-8.3.0 HTSlib/1.10.2-GCC-8.3.0 RepeatMasker/4.0.9-p2-gompi-2019b-HMMER BCFtools/1.10.2-GCC-8.3.0 BWA/0.7.17-intel-2019b Java/11.0.2 R-bundle-Bioconductor/3.10-fosscuda-2019b-R-3.6.2
mu
ml Kraken/1.1-foss-2019b-Perl-5.30.0
conda activate base (environtment ที่เรามีอยู่เดิม) หรือ conda activate gridss (environtment ที่เราสร้างใหม่)
gridss --help
...