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Updated: 22 December 2023

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An example for MPAS 8.0.1 is as shown below.

Code Block
languagebash
cd $DIR
wget https://github.com/MPAS-Dev/MPAS-Model/archive/refs/tags/v8.0.1.tar.gz
tar xzf v8.0.1.tar.gz
mv MPAS-Model-8.0.1 MPAS
cd MPAS
Info

For other version, check https://github.com/MPAS-Dev/MPAS-Model/releases.

3. Compile MPAS

Compile each MPAS core

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with your desired floating-point precision; for example,

Code Block
languagebash
make -j4 intel-nersc CORE=init_atmosphere PRECISION=single AUTOCLEAN=true
make -j4 intel-nersc CORE=atmosphere PRECISION=single AUTOCLEAN=true
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Additional notes:

  1. CORE=ocean only supports double precision.

  2. CORE=seaice only supports double precision and only serial build (-j1) works.

  3. Users may have to add parentheses for the print function, i.e., print xxx → print(xxx), in

    • ./src/core_ocean/BGC/makedep.py

    • ./src/core_ocean/cvmix/makedep.py

    to make these files compatible with Python3.

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Code Block
languagebash
#!/bin/bash
#SBATCH -p compute             # Partition
#SBATCH -N 1                   # Number of nodes
#SBATCH --ntasks-per-node=64   # Number of MPI processes per node
#SBATCH --cpus-per-task=2      # Number of OpenMP threads per MPI process
#SBATCH -t 5-00:00:00          # Job runtime limit
#SBATCH -J MPAS                # Job name
#SBATCH -A ltxxxxxx            # Account *** {USER EDIT} ***

module purge
module load ParallelIO/2.6.2-cpeIntel-23.09
module load METIS/5.1.0-cpeIntel-23.09

export OMP_STACKSIZE="32M"
export OMP_NUM_THREADS=${SLURM_CPUS_PER_TASK}

ulimit -s unlimited

srun -n${SLURM_NTASKS} -c${SLURM_CPUS_PER_TASK} ./init_atmosphere_model
srun -n${SLURM_NTASKS} -c${SLURM_CPUS_PER_TASK} ./atmosphere_model

Info

MPAS static geographical datasets are available at /project/common/MPAS_Static/ ,
while WPS static datasets are available at /project/common/WPS_Static/geog .

Users can choose one of them as config_geog_data_path in namelist.init_atmosphere.

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Contact Us
ThaiSC support service : thaisc-support@nstda.or.th

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