BLAST+

Official website : https://blast.ncbi.nlm.nih.gov/Blast.cgi

1 Available version
2 BLAST database
3 Job submission script

Available version

Version	Module name

Version	Module name
2.14.0	BLAST+/2.14.0-cpeGNU-23.03

BLAST database

NCBI nt and nr are available via BLASTDB module. To using these databases, use the following command

module load BLASTDB

Job submission script

An example script

#!/bin/bash
#SBATCH -p compute    # specific partition (compute,memory)
#SBATCH -N 1 -c 16    # -N 1 must be 1, -c can be 4, 8, 16, 32, 64 depending on the requirement
#SBATCH -t 24:00:00   # job time limit <hr:min:sec>
#SBATCH -A lt200xxx   # project ID
#SBATCH -J blast-nr   # job name

module resotre
module load BLAST+
module load BLASTDB

blastp -num_threads $SLURM_CPUS_PER_TASK -db nr -query input_blastp